Jobs

The Office of the Associate Dean in the Cumming School of Medicine invites applications for two (2) Intermediate Programmer Analyst(s). This Full-time Fixed Term position is for approximately 12 months (based on length of grant funding), with the possibility of extension.

Reporting to the Manager, Bioinformatics.

The CHGI bioinformatics team provides sequencing project design, quality control, statistical analysis, public repository submission, and biological interpretation services (linking new results to known results in the literature) to users of the Cumming School of Medicine’s core CHGI sequencing facility.

Position:                     Bioinformatician II
Location:                    MaRS Centre, Toronto
Department:               Genome Sequence Informatics
Reports To:                Senior Manager
Salary:                        Commensurate with level of experience
Hours:                        35 hours/week
Job Type:                   Hybrid
Status:                        Full-time, Permanent

OICR is seeking an experienced and passionate Bioinformatician to join the Genome Sequence Informatics (GSI) team at OICR. The Bioinformatician functions in a junior to intermediate technical role that requires an individual with proven skills in both biology and computing, and who is dedicated to supporting a multi-disciplinary team of scientists, laboratory technicians, and informatics professionals.

GSI is part of the Genomics program at OICR (https://genomics.oicr.on.ca/) and supports the sequencing teams that manage both clinical and research projects. GSI designs applications to streamline and automate analysis, control the data lifecycle, and create useful and dynamic reports at scale. We ensure that data flows smoothly, securely and correctly from the lab through to the clinicians and researchers who use it. We use languages and software tools like Java, Python, Perl, Javascript, OpenStack, Open Grid Engine, Univa, MySQL and PostgreSQL.

The main areas covered by GSI are:

• Lab tracking: Develop the open source MISO LIMS (https://miso-lims.github.io) augmented by other applications.
• Pipeline/Data management: Develop and run workflow systems like Vidarr (https://oicr-gsi.github.io/vidarr/) and Cromwell (https://cromwell.readthedocs.io) to automate and streamline data analysis, tracking, and workflow management.
• Data release: Delivery of sequencing and analysis, archiving of data for long term storage and deposition of data to public archives.
• Reporting: Maintain of a suite of specialized reports for quality control, forecasting, and lab operations, and to accompany data delivery.
• Analysis: Development of analysis workflows to run in our pipeline system, and development of tools supporting analysis tracking and data management. Conducting project-specific analysis on sequencing data with an emphasis on cancer genomics, both for internal research projects and for collaborators.
• Cancer Genome Interpretation: Analyze and interpret genomic data using accredited pipelines and processes for clinical purposes.

Job Posting #914878

Position: Bioinformatics/Data Science Analyst 

Site: Princess Margaret Cancer Centre

Department: Medical Oncology and Hematology

Reports to: Principal Investigator

Hours: 37.5 per week

Status: Permanent Full-time

University Health Network (UHN) is looking for an experienced professional to fill the key role of Bioinformatics Analyst in the Medical Oncology and Hematology Division. 

Transforming lives and communities through excellence in care, discovery and learning.

The University Health Network, where “above all else the needs of patients come first”, encompasses Princess Margaret Cancer Centre, Toronto General Hospital, Toronto Western Hospital, Toronto Rehabilitation Institute, and the Michener Institute of Education at UHN. The breadth of research, the complexity of the cases treated, and the magnitude of its educational enterprise has made UHN a national and international resource for patient care, research and education. With a long tradition of groundbreaking firsts and a purpose of “Transforming lives and communities through excellence in care, discovery and learning”, the University Health Network (UHN), Canada’s largest research teaching hospital, brings together over 16,000 employees, more than 1,200 physicians, 8,000+ students, and many volunteers. UHN is a caring, creative place where amazing people are amazing the world.

University Health Network (UHN) is a research hospital affiliated with the University of Toronto and a member of the Toronto Academic Health Science Network. The scope of research and complexity of cases at UHN have made it a national and international source for discovery, education and patient care. Research across UHN’s five research institutes spans the full spectrum of diseases and disciplines, including cancer, cardiovascular sciences, transplantation, neural and sensory sciences, musculoskeletal health, rehabilitation sciences, and community and population health. Find out about our purpose, values and principles here.

The Division of Medical Oncology and Hematology, University Health Network requires Bioinformatics Analyst to work with its oncology and hematology clinical trial portfolio.  This division runs a broad spectrum of therapeutic trials across all types of malignant disease

Job Posting #914879

Position: Bioinformatics Specialist/Data Science Specialist

Site: Princess Margaret Cancer Centre

Department: Medical Oncology and Hematology

Reports to: Principal Investigator

Hours: 37.5 per week

Status: Permanent Full-time

University Health Network (UHN) is looking for an experienced professional to fill the key role of Bioinformatics Specialist in the Division of Medical Oncology and Hematology. 

Transforming lives and communities through excellence in care, discovery and learning.

The University Health Network, where “above all else the needs of patients come first”, encompasses Princess Margaret Cancer Centre, Toronto General Hospital, Toronto Western Hospital, Toronto Rehabilitation Institute, and the Michener Institute of Education at UHN. The breadth of research, the complexity of the cases treated, and the magnitude of its educational enterprise has made UHN a national and international resource for patient care, research and education. With a long tradition of groundbreaking firsts and a purpose of “Transforming lives and communities through excellence in care, discovery and learning”, the University Health Network (UHN), Canada’s largest research teaching hospital, brings together over 16,000 employees, more than 1,200 physicians, 8,000+ students, and many volunteers. UHN is a caring, creative place where amazing people are amazing the world.

University Health Network (UHN) is a research hospital affiliated with the University of Toronto and a member of the Toronto Academic Health Science Network. The scope of research and complexity of cases at UHN have made it a national and international source for discovery, education and patient care. Research across UHN’s five research institutes spans the full spectrum of diseases and disciplines, including cancer, cardiovascular sciences, transplantation, neural and sensory sciences, musculoskeletal health, rehabilitation sciences, and community and population health. Find out about our purpose, values and principles here.

The Division of Medical Oncology and Hematology, University Health Network requires  Bioinformatics Specialist to work with its oncology and hematology clinical trial portfolio.  This division runs a broad spectrum of therapeutic trials across all types of malignant disease