Protein Expression

This section contains links to protein expression data and resources for analysis of data including 2D gels.

Found 12 links

Displaying 12 links

Cyber-T WebserverTool Content

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Cyber-T provides differential analysis tools for high-throughput data such as data from microarrays, next generation sequencing platforms and mass spectrometry. Various statistical analyses are computed using R-code.

GELBANKDatabase Content

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GELBANK is a database of 2D gel images of proteomes for species with completed genomes. The user can search by sequence description or fragment, or by gel characteristics. Links are made between the sequence and gel when available.

GelScape and GelBankTool Content

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GelScape is a platform-independent 1D and 2D gel analysis system that is freely available. Features include the ability to mark spots, to measure spot intensities and to archive gel images and annotations to the public database GelBank. Includes searchable access to GelBank\'s repository.

GeneExpress2.1Tool Content

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Integrated system for data analysis with information about expression and gene networks, also contains transcriptional regulatory regions database (TRRD).

NCI FlickerTool Content

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Flicker provides the means to compare images from different internet sources using a java-enabled web browser. It was originally designed for the comparison of 2D gels.

ProMoSTTool Content

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ProMoST (Protein Modification Screening Tool) is a program to calculate accurate MW and pI values from proteins considering the effects of post-translational modifications. Results are displayed as calculated values of pI and MW for each protein and are also plotted on two-dimensional (2D) gel images.

This content is being maintained by halligan.

ProteinCCDTool Content

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Protein Crystallographic Construct Design (Protein CCD) is a meta-web server that facilitates the design of several truncated constructs of a protein using experimental data or sequence analysis tools. From input DNA sequence, information on disorder, coiled coils, transmembrane segments, domains and domain linkers are collected from secondary structure prediction servers. Users can select starts and ends for protein constructs and ProteinCCD wil design suitable PCR primers.

SWISS-2DPAGEDatabase Content

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This is a 2D gel electrophoresis database containing data for proteins identified on SDS-PAGE or 2D-PAGE reference maps.

links directory index: 103
TitlePublication YearGoogle Scholar Citation Count
The 1999 SWISS-2DPAGE database update2000103