Peptides

Tools and resources for the prediction and analysis of peptides.

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AVPpredTool Content

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ANPpred webserver is an antiviral peptide prediction server. It contains 1245 peptides which have been experimentally validated for antiviral activity against human viruses.

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CFM-IDTool Content

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CFM-ID (Competitive Fragmentation Modeling) is a web server for annotation, spectrum prediction and metabolite identification from tandem mass spectra data.

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ConoServerDatabase Content

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Database specializing in the sequences and structures of conopeptides, toxins expressed by marine cone snails.

DAMPDDatabase Content

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Dragon AntiMicrobial Peptide Database: manually curated database of known and putative antimicrobial peptides.

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DAMPD: a manually curated antimicrobial peptide database20121

MimoDBDatabase Content

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A mimotope database. The MimoDB database also provides tools for simple and advanced searches, structure visualization, BLAST and alignment view on the fly.

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TitlePublication YearGoogle Scholar Citation Count
MimoDB 2.0: a mimotope database and beyond20122

NeuroPIDTool Content

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NeuroPID is a prediction tool for neuropeptide precursors (NPPs) and neuromodulators.

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OPM databaseDatabase Content

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Orientations of Proteins in Membranes (OPM) database: curated resource, provides spatial positions of membrane-bound peptides and proteins of known 3D structure, together with their structural classification, topology and intracellular localization. Data can be searched and retrieved, database offers downloadable coordinates. Protein images and visualization tools provided.

PEP-SiteFinderTool Content

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PEP-SiteFinder is a web server tool for the blind identification of peptide binding sites on protein surfaces.

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PepStrTool Content

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The Pepstr server predicts the tertiary structure of small peptides with sequence length varying between 7 to 25 residues. The prediction strategy is based on the realization that β-turn is an important and consistent feature of small peptides in addition to regular structures. Thus, the methods uses both the regular secondary structure information predicted from PSIPRED and β-turns information predicted from BetaTurns.

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