General Resources

The resources listed here include tools and databases for general information on a variety of model organisms.

Found 34 links

Displaying 15 links

A Quick Guide To Sequenced GenomesResource Content

Share This Link

The Quick Guide includes descriptions of more than 150 organisms and has links to sequencing centers and scientific abstracts.

links directory index: not available
TitlePublication YearGoogle Scholar Citation Count

dbESTDatabase Content

Share This Link

Expressed Sequence Tags database; a division of GenBank containing single-pass cDNA sequence reads

links directory index: not available
TitlePublication YearGoogle Scholar Citation Count

DOE Joint Genome Institute Genome PortalDatabase Content

Share This Link

The Joint Genome Institute Genome Portal contains browseable and blastable genome assemblies for several organisms, including Pufferfish, Frog, and Sea squirt.

Entrez GenomesDatabase Content

Share This Link

List of prominent complete genomes with access to BLAST and precomputed conserved domains and protein homologs in complete genome context.

links directory index: not available
TitlePublication YearGoogle Scholar Citation Count
user feedback
0
external linksLink on Twitter

euGenes: Genomic Information for Eukaryotic OrganismsDatabase Content

Share This Link

Summary of gene and genomic information automatically maintained from primary eukaryotic organism databases: gene symbol, full name, chromosome, genetic and molecular maps, gene products, links to extended gene information.

links directory index: 39
TitlePublication YearGoogle Scholar Citation Count
euGenes: a eukaryote genome information system200239

GCUA: Graphical Codon Usage AnalyserTool Content

Share This Link

Graphical representation of codon bias

links directory index: not available
TitlePublication YearGoogle Scholar Citation Count

Gene Set BuilderTool Content

Share This Link

Gene Set Builder is a database-driven, web-based tool designed to help researchers compile, store, export, and share sets of genes. This application supports the 17 eukaryotic genomes found in version 32 of the Ensembl database, which includes species from yeast to human. User-created information such as sets and customized annotations are stored and can be shared to facilitate easy access. Gene sets stored in the system can be exported in a variety of output formats - as lists of identifiers, in tables, or as sequences.

Genome Centres and DatabasesResource Content

Share This Link

Genome centers and databases listed by organism.

links directory index: not available
TitlePublication YearGoogle Scholar Citation Count

Genome MapsTool Content

Share This Link

Genome Maps is a web server for genome browsing which implements an innovative model of data transfer and management for fast genome browsing. Relevant biological data on genes, transcripts, exons, regulatory features, SNPs, karotypes, etc. are imported from web services and available as tracks.

links directory index: not available
TitlePublication YearGoogle Scholar Citation Count

Intergr8Tool Content

Share This Link

Integr8 is a browser for information relating to completed genomes and proteomes. It provides access to species descriptions, literature, statistical analysis and summary information about each complete proteome; and integrates data from a variety of sources, including InterPro, CluSTr and GO.

Associated Tag Cloud