Fly

This section contains links to genome resources, tools, and databases for flies including Drosophila and the mosquito.

Found 28 links

Displaying 15 links

BSQATool Content

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BeeSpace Question/Answering (BSQA) system is a web server that performs integrated text mining for insect biology, covering diverse aspects from molecular interactions of genes to insect behavior. BSQA recognizes a number of entities and relations in Medline documents about the model insect, Drosophila melanogaster.

DIANA-microT v5.0Tool Content

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The DIANA-microT web server predicts targets for miRNAs and provides functional information on the predicted miRNA:target gene interaction from various online biological resources. Updates enable the association of miRNAs to diseases through bibliographic analysis and connection to the UCSC genome browser. Updates include sophisticated workflows.

DroPNetTool Content

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DroPNet is a webserver for generating and analyzing Drosophila protein-protein interaction networks. Input data is a list of genes from an experiment such as RNAi screen.

E-RNAiTool Content

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E-RNAi is a tool for designing and evaluating dsRNA constructs suitable for RNAi experiments in 12 organisms including Drosophila, C. elegans, human and other emerging model organisms. E-RNAi also facilitates the design of secondary RNAi reagents for validation experiments, evaluation of pooled siRNA reagents and batch design.

Ensembl Mosquito Genome BrowserDatabase Content

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This site presents the tenfold whole genome shotgun assembly of the PEST strain of anopheles gambiae, as prepared by The International Anopheles Genome project.

links directory index: 865
TitlePublication YearGoogle Scholar Citation Count
The Ensembl genome database project.2002865

FlyBaseDatabase Content

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FlyBase is a database of genetic and molecular data for Drosophila. FlyBase includes data on all species from the family Drosophilidae; the primary species represented is Drosophila melanogaster.

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external linksLink on Wikipedia

FlyBaseDatabase Content

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Database and web portal for genetic and genomic information on fruit fly Drosophila melanogaster and related fly species.

links directory index: 8
TitlePublication YearGoogle Scholar Citation Count
FlyBase 101--the basics of navigating FlyBase20128

FlyRNAiDatabase Content

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Database of Dorsophila RNA interference (RNAi) Screening Center.

GeneMANIATool Content

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GeneMANIA is web interface for generating hypotheses about gene function, analyzing gene lists and prioritizing genes for functional assays. Users input a query list for extension and weighting with functionally similar genes. Six organisms are supported.

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Genome Biology Release 3 of the Drosophila genomeResource Content

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A series of refereed research articles describing Release 3 of the Drosophila genome are freely available online. The articles describe the finishing and annotation of the genome sequence, computational tools, and functional studies.

Genome SurveyorTool Content

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Genome Surveyor is a tool for discovery and analysis of cis-regulatory elements and transcription factors in Drosphila built on the GBrowse genome browser.

links directory index: 3
TitlePublication YearGoogle Scholar Citation Count
Genome Surveyor 2.0: cis-regulatory analysis in Drosophila20113

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