Fish

Resources include sequences, annotations, and comparative vertebrate genomics for various species of fish.

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DOE Joint Genome Institute Genome PortalDatabase Content

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The Joint Genome Institute Genome Portal contains browseable and blastable genome assemblies for several organisms, including Pufferfish, Frog, and Sea squirt.

Ensembl Fugu Genome BrowserDatabase Content

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Fugu Ensembl is a joint project between The IMCB and the EMBL - EBI to produce and maintain an automatic annotation of the Fugu Genome.

links directory index: 865
TitlePublication YearGoogle Scholar Citation Count
The Ensembl genome database project.2002865

Ensembl Zebrafish Genome BrowserDatabase Content

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This ensembl website features the zebrafish whole genome shotgun assembly sequence.

links directory index: 865
TitlePublication YearGoogle Scholar Citation Count
The Ensembl genome database project.2002865

UCSC Fugu Genome Browse GatewayTool Content

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Provides a rapid and reliable display of any requested portion of the Fugu genome at any scale, together with dozens of aligned annotation tracks.

links directory index: 1185
TitlePublication YearGoogle Scholar Citation Count
The UCSC Genome Browser Database20031185

Vega Annotation BrowserTool Content

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In collaboration with the genome sequencing centres, Vega attempts to present consistent high-quality curation of finished sequence.

links directory index: 9
TitlePublication YearGoogle Scholar Citation Count
VEGA, the genome browser with a difference20059

ZFINDatabase Content

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ZFIN, the Zebrafish Model Organism Database serves as the central repository and web-based resource for zebrafish genetic, genomic, phenotypic and developmental data. ZFIN manually curates comprehensive data for zebrafish genes, phenotypes, genotypes, gene expression, antibodies, anatomical structures and publications. A wide-ranging collection of web-based search forms and tools facilitates access to integrated views of these data promoting analysis and scientific discovery. Data formats include text, images and graphical representations.

zfishbookDatabase Content

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Database of revertible protein trap gene-breaking transposon (GBT) insertional mutants in the zebrafish Danio rerio.