Process Development Coordinator - Clinical

Institution/Company:
Canada's Michael Smith Genome Sciences Centre at BC Cancer
Location:
Vancouver, BC, Canada
Job Type:
  • Programmer/Developer
Degree Level Required:
Bachelor's, Masters, PhD
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Process Development Coordinator - Clinical

The PDC monitors existing processes and recommends and/or develops new processes in support of the clinical sequencing objectives at the GSC. The PDC designs and performs informatic experiments to validate either existing methods or novel methods providing new functionality. The successful candidate will strive to streamline existing functionality, and maximize output quality and efficiency while balancing costs. Monitoring of results and comparison to outlined standards will be performed.

The PDC collaborates closely with key stakeholders for the clinical process including the clinical director, bioinformatics groups and quality assurance group.

Responsibilities:

Oversees the development and testing of clinical bioinformatics production processes by:

  1. Designing and performing experiments pertaining to the generation of clinically relevant results. This includes, but is not limited to, the development and testing of new analyses, protocol optimization, Quality Assurance and Quality Control, testing of prototypes and related activities. The PDC continually monitors performance of protocols within the production process and identifies areas for improvement. All activities will yield documented recommendations and implementation plans.

  2. Troubleshooting existing clinical computational processes where necessary. Makes recommendations and adjustments and reports problems.

  3. Training designated members of the clinical bioinformatics group in new or optimized analysis workflows. Writes or revises protocols accordingly.

  4. Performing technical functions related to the Bioinformatics groups of the GSC.

  5. Other related duties as necessary.

Qualifications:

• Graduation from a recognized Bachelor’s program in an appropriate discipline such as Computer Science, Bioinformatics, Genetics, Molecular Biology or Biochemistry (PhD) preferred); • Five (5) years of recent related experience in a research and or clinical laboratory including supervisory experience

OR

An equivalent combination of education, training and experience acceptable to the GSC Group Leaders.

Skills and Knowledge

• Proven expertise with Python and/or other similar high level languages. • Demonstrated ability in R or other similar statistical programming languages and in statistical analysis. • Functional knowledge of distributed version control systems, such as Git. • Demonstrated experience with next generation/ third generation sequencing technology with an in-depth understanding of standards and guidelines for validating clinical bioinformatics analysis pipelines using these technologies. • Excellent verbal and written communication skills. • Comfortable working in a Linux environment, including experience with shell scripting and common command-line tools. • Demonstrated interpersonal skills including the ability to work effectively with others in a team environment. • Experience liaising with multiple stakeholders to support consensus goals. • Demonstrated ability to efficiently organize work assignments and establish priorities to meet set milestones. • Demonstrated ability to write technical documents including validations and procedure manuals • Excellent analytical skills • Demonstrated ability to accept responsibility and work independently. • Experience with bioinformatic workflow managers eg Nextflow would be considered an asset.

  • How to Apply

    Please submit a detailed cover letter and resume to bcgscjobs@bcgsc.ca, using Process Development Coordinator-Clinical PCD_E00375_2021_08_11 in the subject line of your email. This posting will remain online until filled.