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2009 Course Content

Interpreting Gene Lists from -omics Studies

Location: Downtown Toronto, ON
Date: July 9-10, 2009

  • Module 1: Introduction to gene lists (Chair: Gary Bader)
    PDF | PPT | MP4 (VIDEO) |
  • Module 2: Finding over-represented gene functions in gene lists (Chair: Quaid Morris)
    PDF | PPT | MP4 (VIDEO) |
  • Module 3: Predicting transcriptional regulation from gene lists (Chair: Wyeth Wasserman)
    PDF | PPT | MP4 (VIDEO) |
  • Module 4: Pathway and network analysis of gene lists (Chair: Gary Bader)
    PDF | PPT |

Clinical Biomarkers

Location: Toronto, ON
Date: July 16-17, 2009

  • Module 1: Introduction to biomarkers (Faculty: Sohrab Shah & Anna Lapuk)
    PDF | PPT | MP4 (VIDEO) |
  • Module 2: Identifying candidate biomarkers from a high-dimensional data set (Faculty: Shah & Lapuk)
    PDF | PPT | MP4 (VIDEO) |
  • Module 3: Introduction to clinical variables and ‘personalized medicine’ (Faculty: Shah & Lapuk)
    PDF | PPT | MP4 (VIDEO) |
  • Module 4: Lab - Reproducing published data: Integrating clinical and genomic data
    PDF | PPT | MP4 (VIDEO) |

Informatics on High Throughput Sequencing

Location: Downtown Toronto, ON
Date: July 23-24, 2009

Exploratory Data Analysis Essential Statistics using R

Location: Toronto, ON
Date: October 2-3, 2009