Related Links for GlyNest and CASPERTool Content

Found 17 links

Displaying 15 links

CS23DTool Content

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Chemical Shift to 3D Structure (CS23D) generates accurate 3D protein structures using only NMR chemical shifts and sequence data. Output is a set of PDB coordinates for the protein.

GeNMRTool Content

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Generate NMR structures (GeNMR) is a web server for generating 3D protein structures using input sequence data, NOE-based distance restraints or NMR chemical shifts. Output is a set of PDB coordinates for the input protein.

GlycoFragmentTool Content

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GlycoFragment is a tool that takes the sequence of a carbohydrate structure as input, and calculates all theoretically possible fragments which are likely to occur in mass spectra.

This content is being maintained by luetteke.

GlycomeDBDatabase Content

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GlycomeDB integrates the structural and taxonomic data of all major public carbohydrate databases, as well as carbohydrates contained in the Protein Data Bank. The database is a unified resource for carbohydrate structures. GlycomeDB retains the links to the original databases and is updated at weekly intervals with the newest structures available from the source databases.

links directory index: 2
TitlePublication YearGoogle Scholar Citation Count
GlycomeDB--a unified database for carbohydrate structures20112

GlycoSearchMSTool Content

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GlycoSearchMS takes a list of mass spectra peak values as input and searches for matches with the calculated fragments of SweetDB structures.

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GlycoViewerTool Content

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The GlycoViewer is a web-based tool that can visualize, summarize and compare sets of gylcan structures.

HMDBDatabase Content

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The Human Metabolome Database (HMDB) is a freely available electronic database containing detailed information about small molecule metabolites found in the human body. The database supports extensive text, sequence, chemical structure and relational query searches.

KCaMTool Content

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The KEGG Carbohydrate Matcher (KCaM) takes glycan structures as input and returns a list of similar glycan structures using a tree-structure alignment algorithm.

LGATool Content

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Local-Global Alignment (LGA) performs structural alignments for two proteins structures or fragments of 3D protein structures.

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