- Non-alphanumeric characters (from '-') are stripped.
- All search keyword are used in searching links:
e.g. bioinformatics links directory will search for links that contain all three keywords in title, description, or tags. - You can search for an exact phrase by enclosing the query in quotes:
e.g. "bioinformatics links directory" - e.g. Search query "genomic sequences" dna will search for links containing the phrase "genomic sequences" and dna.
- You can include OR uppercase keyword:
e.g. dna OR rna looks for keywords dna or rna. - You can include - prefix or NOT uppercase keyword to define keywords that should not be included:
e.g. dna OR rna NOT protein (alternatively: dna OR rna -protein) will look for links with keywords DNA or RNA, but not protein
jpHMM
http://jphmm.gobics.de/ [open in a new window]
Jumping Profile Hidden Markov Model (jpHMM) takes a HIV-1 or HBV genome sequence and uses a pre-calculated multiple alignment of the major HIV-1 or HBV subtypes to predict the phylogenetic breakpoints and HIV/HBV subtype of the submitted sequence.
This content is being maintained by akschultz.
links directory index: 81| Title | ||
|---|---|---|
| jpHMM: improving the reliability of recombination prediction in HIV-1 | 2009 | 22 |
| jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1 | 2006 | 23 |
| A novel approach to remote homology detection: jumping alignments | 2002 | 36 |
user feedback
featured link
CASTphttp://sts.bioengr.uic.edu/castp/Computed Atlas of Surface Topography of proteins (CASTp) locates and measures concave surface regions on 3D protein structures. This tool can be used to study surface features, binding sites, and functional…
CASTphttp://sts.bioengr.uic.edu/castp/Computed Atlas of Surface Topography of proteins (CASTp) locates and measures concave surface regions on 3D protein structures. This tool can be used to study surface features, binding sites, and functional…
163 Resources
620 Databases
1376 Tools
