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JEvTraceTool Content

http://www.cmpharm.ucsf.edu/~marcinj/JEvTrace/ [open in a new window]

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Protein >
3-D Structure Comparison
Protein >
3-D Structure Retrieval/Viewing
Protein >
Annotation and Function
Protein >
Phylogeny Reconstruction
Sequence Comparison >
Analysis of Aligned Sequences

Jevtrace is a tool that combines multiple sequence alignments, phylogenetic, and structural data for identification of functional sites in proteins.

links directory index: 845
TitlePublication YearGoogle Scholar Citation Count
JEvTrace: refinement and variations of the evolutionary trace in JAVA200218
An evolutionary trace method defines binding surfaces common to protein families1996827
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tagsamino acid sequence amino acid sequence homology animals bacterial proteins binding sites carrier proteins conserved sequence dna-binding proteins factual databases genetic variation glucocorticoid receptors haemophilus influenzae humans molecular evolution molecular models molecular sequence data mutation phylogeny protein conformation proteins quaternary protein structure rats rna-binding proteins sequence alignment src homology domains streptococcus pneumoniae zinc fingers
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featured linkTool ContentInterProScanhttp://www.ebi.ac.uk/InterProScan/InterProScan allows you to query using different protein signature recognition methods to look up InterPro annotations for your sequence. These annotations results often include gene ontology terms that…
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