http://bioinformatics.ca/links_directory/tag/zebrafishhttp://bioinformatics.ca/links_directory/tag/zebrafish/feed en http://www.compsysbio.org/elastin/ElastoDB is a repository for well-characterized elastin sequences to facilitate its study. The database has since expanded to include other non-elastin sequences that share elastic properties. 13426Sun, 19 May 2013 00:20:36 -0400 http://www.esat.kuleuven.be/endeavourENDEAVOUR is a computational approach to prioritize candidate genes for further study. Users input training genes already known to be involved in the process under study and the candidate genes to prioritize. The web server supports multiple species and integrates multiple genomic data to generate the final prioritization. ENDEAVOUR has been benchmarked in silico and experimentally validated leading to the discovery of novel disease genes in several genetic diseases.12956Mon, 13 May 2013 18:40:25 -0400 http://cbdm.mdc-berlin.de/tools/genie/Genie evaluates the literature attached to all genes in a genome and to their orthologs for a selected topic. Hundreds of species and millions of genes are supported. Running times range from a few seconds to a minute in most of the cases. 12159Sun, 19 May 2013 04:20:13 -0400 http://zfin.orgZFIN, the Zebrafish Model Organism Database serves as the central repository and web-based resource for zebrafish genetic, genomic, phenotypic and developmental data. ZFIN manually curates comprehensive data for zebrafish genes, phenotypes, genotypes, gene expression, antibodies, anatomical structures and publications. A wide-ranging collection of web-based search forms and tools facilitates access to integrated views of these data promoting analysis and scientific discovery. Data formats include text, images and graphical representations.11880Sun, 19 May 2013 03:10:14 -0400 http://iubio.bio.indiana.edu:8089/Summary of gene and genomic information automatically maintained from primary eukaryotic organism databases: gene symbol, full name, chromosome, genetic and molecular maps, gene products, links to extended gene information.11351Sun, 19 May 2013 21:10:31 -0400 http://genes.mit.edu/burgelab/rescue-ese/Server for the identification of hexnucleotide exonic splicing enhancers (ESEs). Also contains a list of 238 identified ESEs for human genes.9852Sat, 18 May 2013 09:40:28 -0400 http://lagan.stanford.edu/lagan_web/index.shtmlThe LAGAN alignment toolkit consists of components: CHAOS (a pairwise local aligner optimized for non-coding, and other poorly conserved regions of the genome.), LAGAN (a highly parametrizable pairwise global alignment program), Multi-LAGAN , and Shuffle-LAGAN (both variations of LAGAN).9705Wed, 15 May 2013 23:00:46 -0400 http://bibiserv.techfak.uni-bielefeld.de/dialign/Multiple alignment program which assembles a global sequence alignment from gap-free local pairwise alignments. This method could be especially useful when comparing large sequences that have only local similarities.9407Sat, 18 May 2013 18:10:17 -0400 http://conreal.niob.knaw.nl/CONREAL (Conserved Regulatory Elements Anchored Alignment) allows identification of transcription factor binding sites (TFBS) that are conserved between two orthologous promoter sequences.9371Sat, 18 May 2013 19:40:33 -0400 http://dialign.gobics.de/chaos-dialign-submissionThe CHAOS/DIALIGN WWW server is a multiple sequence alignment site which passes input sequences through CHAOS to create a list of local similarites. These similarities serve as anchor points, allowing DIALIGN to conduct global alignments faster. ABC can then be used for the interactive visualization of the alignment.9339Sat, 18 May 2013 08:30:33 -0400