Links tagged with 'transcription factors'

Found 102 links

Displaying 102 links

TitleTypeCitation CountURL
@TOME-2
14
http://abcis.cbs.cnrs.fr/AT2/
ACT
96
http://www.arabidopsis.leeds.ac.uk/act/coexpanalyser.php
AGRIS
19
http://arabidopsis.med.ohio-state.edu/
ALGGEN
276
http://alggen.lsi.upc.es/
ARGO
14
http://wwwmgs.bionet.nsc.ru/mgs/programs/argo/
BEARR
15
http://giscompute.gis.a-star.edu.sg/~vega/BEARR1.0/
BioBayesNet
33
http://biwww3.informatik.uni-freiburg.de:8080/BioBayesNet/
BioMet Toolbox
17
http://www.sysbio.se/BioMet
BioProspector
702
http://robotics.stanford.edu/~xsliu/BioProspector/
CARRIE
30
http://zlab.bu.edu/CARRIE-web
CEAS
73
http://ceas.cbi.pku.edu.cn
CENTDIST
6
http://compbio.ddns.comp.nus.edu.sg/~chipseq/centdist/
ChIP-Array
3
http://wanglab.hku.hk/ChIP-Array
CisRegTest
9
http://www.moseslab.csb.utoronto.ca/alan/cis_reg_test.html
Cluster Buster
171
http://zlab.bu.edu/cluster-buster/
CMA
66
http://www.gene-regulation.com/pub/programs/cma/CMA.html
CompareProspector
164
http://compareprospector.stanford.edu/
CONREAL
125
http://conreal.niob.knaw.nl/
Consite
514
http://www.phylofoot.org/consite/
CREME
65
http://creme.dcode.org/
CRSD
28
http://140.120.213.10:8080/crsd/main/home.jsp
DATF
164
http://datf.cbi.pku.edu.cn
DCODE.ORG
32
http://www.dcode.org/
DiRE
31
http://dire.dcode.org
DroID
10
http://droidb.org/
Drosophila DNase I footprint database
123
http://www.flyreg.org/
DRTF
68
http://drtf.cbi.pku.edu.cn/
E-RNAi
579
http://e-rnai.dkfz.de/
ECR Browser
222
http://ecrbrowser.dcode.org/
FANTOM
5
http://fantom.gsc.riken.jp/4/
FANTOM - Functional Annotation of Mouse
3
http://www.gsc.riken.go.jp/e/FANTOM/
FatiGOplus
1322
http://www.fatigo.org/
Filamentous Fungal Gene Expression Database (FFGED)
158
http://bioinfo.townsend.yale.edu/
FlyFactorSurvey
9
http://pgfe.umassmed.edu/TFDBS/
FlyTF
12
http://www.mrc-lmb.cam.ac.uk/genomes/FlyTF/old_index.html
Footer
26
http://biodev.hgen.pitt.edu/Footer/
GBrowse
727
http://gmod.org/wiki/Gbrowse
Genome Surveyor
3
http://veda.cs.uiuc.edu/gs
HHpred
539
http://protevo.eb.tuebingen.mpg.de/hhpred
HLungDB
7
http://www.megabionet.org/bio/hlung/
iCR
48
http://210.212.215.199/icr/index.html
JASPAR
716
http://jaspar.cgb.ki.se/cgi-bin/jaspar_db.pl
JASPAR
119
http://jaspar.cgb.ki.se
MAPPER2 Database
192
http://genome.ufl.edu/mapperdb
Match
591
http://www.gene-regulation.com/pub/programs.html#match
MDscan
575
http://robotics.stanford.edu/~xsliu/MDscan/
MEME Suite
3841
http://meme.nbcr.net/meme/intro.html
mirConnX
5
http://www.benoslab.pitt.edu/mirconnx
miRGen
30
http://www.diana.pcbi.upenn.edu/miRGen
MoD Tools
42
http://159.149.109.16/modtools/
MONKEY
132
http://labs.csb.utoronto.ca/moses/monkey.html
MotifViz
27
http://biowulf.bu.edu/MotifViz/
NXSensor
6
http://www.sfu.ca/~ibajic/NXSensor/
oPOSSUM
224
http://www.cisreg.ca/oPOSSUM_new/
P-Match
109
http://www.gene-regulation.com/cgi-bin/pub/programs/pmatch/bin/p-match.cgi
PAP
72
http://bioinformatics.wustl.edu/webTools/portalModule/PromoterSearch.do
PathGuide
152
http://www.pathguide.org/
Pathway Hunter Tool
75
http://pht.tu-bs.de/PHT/
PatSearch
105
http://itbtools.ba.itb.cnr.it/patsearch
Phyloscan
4
http://bayesweb.wadsworth.org/phyloscan/
PlantTFDB 2.0
19
http://planttfdb.cbi.pku.edu.cn
PlnTFDB
60
http://plntfdb.bio.uni-potsdam.de/
PlnTFDB
171
http://plntfdb.bio.uni-potsdam.de/v3.0/
POBO
37
http://ekhidna.biocenter.helsinki.fi/poxo/pobo/
POCO
10
http://ekhidna.biocenter.helsinki.fi/poxo/poco/
POXO
92
http://www.bioinfo.biocenter.helsinki.fi/poxo
PredictRegulon
44
http://www.cdfd.org.in/predictregulon/
PRI-CAT
5
http://www.ab.wur.nl/pricat
PromoterPlot
7
http://promoterplot.fmi.ch/
ProteDNA
6
http://protedna.csbb.ntu.edu.tw/
Pscan
38
http://www.beaconlab.it/pscan
REDfly
145
http://redfly.ccr.buffalo.edu/?content=/search.php
REDfly
145
http://redfly.ccr.buffalo.edu
REDUCE
43
http://bussemaker.bio.columbia.edu/reduce/
RegPrecise
39
http://regprecise.lbl.gov
RegulonDB
59
http://regulondb.ccg.unam.mx/
RSAT
1280
http://rsat.ccb.sickkids.ca/
rSNP_Guide
22
http://wwwmgs.bionet.nsc.ru/mgs/systems/rsnp/
rVISTA
263
http://rvista.dcode.org/
SISSRs
233
http://dir.nhlbi.nih.gov/papers/lmi/epigenomes/sissrs/
SITECON
30
http://wwwmgs.bionet.nsc.ru/mgs/programs/sitecon/
SiteSeer
19
http://rocky.bms.umist.ac.uk/SiteSeer/
SNPinfo
60
http://www.niehs.nih.gov/snpinfo
SynoR
16
http://synor.dcode.org/
T-Reg Comparator
30
http://treg.molgen.mpg.de/
TcoF-DB
1
http://cbrc.kaust.edu.sa/tcof/
TFBScluster
37
http://hscl.cimr.cam.ac.uk/TFBScluster_genome_portal.html
TFM-Explorer
4
http://bioinfo.lifl.fr/TFM
TOUCAN 2
296
http://www.esat.kuleuven.ac.be/~saerts/software/toucan.php
TransmiR
37
http://cmbi.bjmu.edu.cn/transmir
VAMPIRE
111
http://genome.ucsd.edu/microarray/
VOMBAT
99
https://www2.informatik.uni-halle.de:8443/VOMBAT/faces/pages/choose.jsp
Web Weeder
294
http://159.149.109.9/modtools/
WebMOTIFS
80
http://fraenkel.mit.edu/webmotifs/
WormBase
206
http://www.wormbase.org/
WormBase
103
http://www.wormbase.org
YEASTRACT
19
http://www.yeastract.com
YMF 3.0
181
http://wingless.cs.washington.edu/YMF/YMFWeb/YMFInput.pl
YPA
3
http://ypa.ee.ncku.edu.tw/
ZiFiT
76
http://bindr.gdcb.iastate.edu/ZiFiT/
Zinc Finger Tools
984
http://www.scripps.edu/mb/barbas/zfdesign/zfdesignhome.php
zPicture and multi-zPicture
92
http://zpicture.dcode.org/

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