> Tag > Links tagged with 'ribosomal proteins'

Links tagged with 'ribosomal proteins'

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PAComplexTool Content

http://PAcomplex.life.nctu.edu.tw [open in a new window]

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Protein > Networks & Interactions, Pathways and Enzymes

PAComplex is a web server for inferring peptide antigen families and binding models from T-cell receptor-peptide MHC complexes.

links directory index: 1
TitlePublication YearGoogle Scholar Citation Count
PAComplex: a web server to infer peptide antigen families and binding models from TCR-pMHC complexes20111
NAR Web Server Issue 2011
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tagsantigen receptors histocompatibility antigens class i molecular models mycoplasma pneumonia peptides pol gene products ribosomal proteins

POPSTool Content

http://mathbio.nimr.mrc.ac.uk/wiki/POPS [open in a new window]

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Protein > 3-D Structural Features

Parameter OPtimised Surfaces (POPS) is an algorithm to calculate accessible surfaces areas at atomic and residue level.

links directory index: 114
TitlePublication YearGoogle Scholar Citation Count
POPS: A fast algorithm for solvent accessible surface areas at atomic and residue level200349
Parameter optimized surfaces (POPS): analysis of key interactions and conformational changes in the ribosome200265
NAR Web Server Issue 2003
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tagsalgorithms amino acids hydrophobic and hydrophilic interactions macromolecular substances molecular models molecular structure nucleic acid conformation nucleic acids protein binding protein conformation proteins ribosomal proteins ribosomal rna ribosomes solvents time factors transfer rna

TSEMATool Content

http://tsema.bioinfo.cnio.es/ [open in a new window]

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Protein > Networks & Interactions, Pathways and Enzymes
Protein > Phylogeny Reconstruction
Sequence Comparison > Analysis of Aligned Sequences

The Server for Efficient Mapping Assessment (TSEMA) predicts possible protein-protein interactions based on the comparision of phylogenetic trees derived from sequences of associated protein families.

links directory index: 325
TitlePublication YearGoogle Scholar Citation Count
TSEMA: interactive prediction of protein pairings between interacting families200616
Similarity of phylogenetic trees as indicator of protein-protein interaction2001309
NAR Web Server Issue 2006
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tagsbacterial genome chaperonin 60 computational biology escherichia coli proteins glutamate-trna ligase gtp-binding proteins molecular evolution monte carlo method phylogeny protein interaction mapping protein sequence analysis proteins proteome ribosomal proteins sequence alignment statistics as topic tertiary protein structure

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