> Tag > Links tagged with 'reverse transcriptase polymerase chain reaction'

Links tagged with 'reverse transcriptase polymerase chain reaction'

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ALEXA-seqTool Content

http://www.alexaplatform.org/alexa_seq/ [open in a new window]

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Expression > Splicing
Expression > Transcript Expression Analysis
RNA > Functional RNAs
RNA > General Resources

A method to analyze massively parallel RNA sequence data to catalog transcripts and assess differential and alternative expression of known and predicted mRNA isoforms. Provides alternative expression annotation databases, source code, a data viewer and other resources to facilitate analysis.

This content is being maintained by mgriffit.

links directory index: 36
TitlePublication YearGoogle Scholar Citation Count
Alternative expression analysis by RNA sequencing201036
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tagsalternative splicing antineoplastic antimetabolites colorectal neoplasms expressed sequence tags fluorouracil gene expression gene expression profiling genetic databases humans messenger rna neoplasm drug resistance next-generation sequencing oligonucleotide array sequence analysis protein isoforms reverse transcriptase polymerase chain reaction rna sequence analysis rna-seq RNAseq sequence alignment tumor cell line whole transcriptome shotgun sequencing

ASePCRTool Content

http://genome.ewha.ac.kr/ASePCR/ [open in a new window]

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DNA > Tools For the Bench
Expression > Splicing

ASePCR (Alternative Splicing electronic PCR) is a tool for carrying out e-PCR to detect differences in amplicon sizes in transcripts from different tissues and organs.

links directory index: 10
TitlePublication YearGoogle Scholar Citation Count
ASePCR: alternative splicing electronic RT-PCR in multiple tissues and organs200510
NAR Web Server Issue 2005
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tagsalgorithms alternative splicing animals base sequence expressed sequence tags humans messenger rna mice molecular sequence data rats reverse transcriptase polymerase chain reaction tissue distribution

mGene.webTool Content

http://www.mgene.org/web [open in a new window]

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DNA > Gene Prediction
Human Genome > Genomics
Model Organisms > General Resources

mGene.web is a web server for the genome wide prediction of protein coding genes from eukaryotic DNA sequences based on pre-computed models of gene structures. Users may also compute their own model using their own data.

links directory index: 35
TitlePublication YearGoogle Scholar Citation Count
mGene: accurate SVM-based gene finding with an application to nematode genomes200927
mGene.web: a web service for accurate computational gene finding20098
NAR Web Server Issue 2009
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tagsalgorithms animals artificial intelligence caenorhabditis caenorhabditis elegans computational biology dna sequence analysis genes genomics helminth genes helminth genome proteins reproducibility of results reverse transcriptase polymerase chain reaction rna splice sites transcription initiation site

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