Links tagged with 'protein conformation'

Found 156 links

Displaying 156 links

TitleTypeCitation CountURL
(PS)2 Protein Structure Prediction Server
27
http://ps2.life.nctu.edu.tw
3D-Jury
775
http://meta.bioinfo.pl/submit_wizard.pl
3dLOGO
98
http://3dlogo.uniroma2.it/3dLOGO/home.html
3Matrix
10
http://motif.stanford.edu/distributions/3matrix/
3Motif
20
http://motif.stanford.edu/distributions/3motif/
AD-ENM
256
http://enm.lobos.nih.gov
ALADYN
6
http://aladyn.escience-lab.org
AquaSAXS
2
http://lorentz.dynstr.pasteur.fr/aquasaxs.php
ArchPred
26
http://manaslu.aecom.yu.edu/loopred/
BAR-PLUS
1
http://bar.biocomp.unibo.it/bar2.0
Berkeley Phylogenomics Group
4963
http://phylogenomics.berkeley.edu/
BioBayesNet
33
http://biwww3.informatik.uni-freiburg.de:8080/BioBayesNet/
BioInfo3D
24
http://bioinfo3d.cs.tau.ac.il/
Bioverse
95
http://bioverse.compbio.washington.edu/
BRENDA
60
http://www.brenda-enzymes.org
BRENDA - The Comprehensive Enzyme Information System
792
http://www.brenda-enzymes.org/
BriX
4
http://brix.crg.es
Cascade PSI-Blast
18
http://crick.mbu.iisc.ernet.in/~CASCADE/CascadeBlast.html
CASTp
1616
http://sts.bioengr.uic.edu/castp/
CDDB
2
http://www.cdyn.org
CLICK
2
http://mspc.bii.a-star.edu.sg/click
Clotbase
0
http://www.clotbase.bicnirrh.res.in/
ClusPro
511
http://cluspro.bu.edu/login.php
Combinatorial Extension of the Optimal Path
1542
http://cl.sdsc.edu/ce.html
ComSin
8
http://antares.protres.ru/comsin/.
CSpritz
3
http://protein.bio.unipd.it/cspritz/
DAnCER
5
http://wodaklab.org/dancer/
DBCP
7
http://120.107.8.16/dbcp
eF-seek
409
http://ef-site.hgc.jp/eF-seek/index.jsp
ElNemo
293
http://igs-server.cnrs-mrs.fr/elnemo/start.html
ePlant
2
http://bar.utoronto.ca/eplant/
EVA
448
http://cubic.bioc.columbia.edu/eva/
EVAcon
15
http://www.pdg.cnb.uam.es/eva/con/index.html
ExPASy Molecular Biology Server
1342
http://www.expasy.org/
FALC-Loop
2
http://falc-loop.seoklab.org/
fastSCOP
16
http://gemdock.life.nctu.edu.tw/fastSCOP/
FeatureMap3D
11
http://www.cbs.dtu.dk/services/FeatureMap3D/
FOLD-RATE
353
http://psfs.cbrc.jp/fold-rate/
FoldMiner and LOCK 2
28
http://foldminer.stanford.edu/
FoldX
232
http://foldx.embl.de/
fPOP
6
http://pocket.uchicago.edu/fpop/
GCView
83
http://toolkit.tuebingen.mpg.de/gcview
GeneSilico
221
https://genesilico.pl/meta2/
GeNMR
19
http://www.genmr.ca
Glyprot
62
http://www.glycosciences.de/modeling/glyprot/php/main.php
HexServer
28
http://hexserver.loria.fr/
HHpred
539
http://protevo.eb.tuebingen.mpg.de/hhpred
ICGEBnet Protein Tools
191
http://www.icgeb.org/protein/
IEDB-3D
3
http://www.iedb.org
Institute of Enzymology Servers
2004
http://www.enzim.hu/index.php?option=com_content&task=blogcategory&id=30&Itemid=92
IntFOLD
9
http://www.reading.ac.uk/bioinf/IntFOLD/
INTREPID
11
http://phylogenomics.berkeley.edu/intrepid
iPBA
3
http://www.dsimb.inserm.fr/dsimb_tools/ipba/
JEvTrace
845
http://www.cmpharm.ucsf.edu/~marcinj/JEvTrace/
KFC Server
29
http://www.mitchell-lab.org/kfc
KINARI-Web
8
http://kinari.cs.umass.edu/
KinDOCK
11
http://abcis.cbs.cnrs.fr/kindock/
KNOTS
127
http://knots.mit.edu/
LiveBench
367
http://meta.bioinfo.pl/livebench.pl
Loc3D
343
http://cubic.bioc.columbia.edu/db/LOC3d/
MAGIIC-PRO
16
http://biominer.bime.ntu.edu.tw/magiicpro/
MarkUs
1
http://wiki.c2b2.columbia.edu/honiglab_public/index.php/Software:Mark-Us
MinActionPath
21
http://lorentz.immstr.pasteur.fr/joel/index.php
MINER
69
http://coit-apple01.uncc.edu/MINER/
MODPROPEP
13
http://www.nii.res.in/~narendra/PROT_PEP_INTERACTION/index.html
MolMovDB
136
http://molmovdb.org/
MolProbity
2881
http://molprobity.biochem.duke.edu/
Motif3D
12
http://umber.sbs.man.ac.uk/dbbrowser/motif3d/motif3d.html
MPI Toolkit
81
http://toolkit.tuebingen.mpg.de
MutDB
64
http://www.mutdb.org/
NetOGlyc Prediction Server
771
http://www.cbs.dtu.dk/services/NetOGlyc/
NMR Constraints Analyser
2
http://molsim.sci.univr.it/constraint
NOMAD-Ref
418
http://lorentz.immstr.pasteur.fr/nomad-ref.php
NQ-Flipper
55
https://flipper.services.came.sbg.ac.at/cgi-bin/flipper.php
NRSAS
2
http://www.receptors.org/NR/servers/html/
nsSNPAnalyzer
43
http://snpanalyzer.uthsc.edu/
oGNM
795
http://ignm.ccbb.pitt.edu/GNM_Online_Calculation.htm
PAST
16
http://past.in.tum.de/
PBE
252
http://bioinformatics.univ-reunion.fr/PBE/
PBIL
40
http://pbil.univ-lyon1.fr/
Pcons.net
253
http://pcons.net/
PCRPi-DB
2
http://www.bioinsilico.org/PCRPIDB
PDB Related Databases
16
http://swift.cmbi.ru.nl/servers/html/index.html
PDBe
133
http://wwpdb.org
PDB_Hydro
27
http://lorentz.immstr.pasteur.fr/solvate_mutate.php
PEP-FOLD
43
http://bioserv.rpbs.univ-paris-diderot.fr/PEP-FOLD
PepBuild
2
http://www.imtech.res.in/bvs/pepbuild/
pepMMsMIMIC
3
http://mms.dsfarm.unipd.it/pepMMsMIMIC
pevoSOAR
55
http://sts.bioengr.uic.edu/pevosoar/
Pfam
11859
http://pfam.sanger.ac.uk/
Phobius
863
http://phobius.sbc.su.se/
Phosfinder
1
http://phosfinder.bio.uniroma2.it
Phospho.ELM
29
http://phospho.elm.eu.org
Phospho3D 2.0
5
http://www.phospho3d.org/
PI2PE
473
http://pipe.scs.fsu.edu/
Pigs
23
http://www.biocomputing.it/pigs/
PISCES
99
http://dunbrack.fccc.edu/pisces/
pKD Server
178
http://enzyme.ucd.ie/cgi-bin/pKD/server_start.cgi
PONGO
73
http://pongo.biocomp.unibo.it/
POPS
114
http://mathbio.nimr.mrc.ac.uk/wiki/POPS
PPG
5
http://bioserv.rpbs.jussieu.fr/cgi-bin/PPG
PRALINE
382
http://ibivu.cs.vu.nl/programs/pralinewww/
PreBI
77
http://pre-s.protein.osaka-u.ac.jp/prebi/
PredictProtein - Sequence Analysis, Structure and Function Prediction
993
http://www.predictprotein.org/
PredUs
27
http://wiki.c2b2.columbia.edu/honiglab_public/index.php/Software:PredUs
PRIDB
8
http://bindr.gdcb.iastate.edu/PRIDB
PRISM
96
http://gordion.hpc.eng.ku.edu.tr/prism/
ProFunc
267
http://www.ebi.ac.uk/thornton-srv/databases/ProFunc/
ProMateus
251
http://bioportal.weizmann.ac.il/promate/
ProSAT2
26
http://projects.villa-bosch.de/dbase/ps2/
PROSESS: A Protein Structure Evaluation Suite and Server
5
http://www.prosess.ca
PROSPECT-PSPP
24
http://csbl.bmb.uga.edu/protein_pipeline
Protein Dipole Server
38
http://bioportal.weizmann.ac.il/dipol/
Protein Peeling 3 D
26
http://www.dsimb.inserm.fr/dsimb_tools/peeling3/
ProteinDBS
21
http://proteindbs.rnet.missouri.edu/
PTGL
2
http://ptgl.zib.de
PVS
10
http://imed.med.ucm.es/PVS/
QSCOP - BLAST
16
http://qscop-blast.services.came.sbg.ac.at/
RbDe
47
http://icb.med.cornell.edu/crt/RbDe/index.xml
RCI
48
http://wishart.biology.ualberta.ca/rci/cgi-bin/rci_cgi_1_d.py
RCSB Protein Data Bank
441
http://www.pdb.org
ReadOut
318
http://gibk26.bio.kyutech.ac.jp/jouhou/readout/
ReMus
22
http://140.121.196.30/remus.asp
RNABindR
166
http://bindr.gdcb.iastate.edu/RNABindR/
RNAcontext
9
http://www.cs.toronto.edu/~hilal/rnacontext/
RosettaDesign
1600
http://rosettadesign.med.unc.edu
RPBS
852
http://bioserv.rpbs.jussieu.fr/
SAM-T08
40
http://compbio.soe.ucsc.edu/SAM_T08/T08-query.html
SCit
16
http://bioserv.rpbs.jussieu.fr/cgi-bin/SCit
SCOP
5646
http://scop.mrc-lmb.cam.ac.uk/scop/
SCRATCH
295
http://www.igb.uci.edu/servers/psss.html
SDM
7
http://www-cryst.bioc.cam.ac.uk/~sdm/sdm.php
SEARCHGTr
18
http://www.nii.res.in/searchgtr.html
Servers at University College London
502
http://bioinf.cs.ucl.ac.uk/web_servers/
Services from Zhou Laboratory
1058
http://cssb.biology.gatech.edu/skolnick/people/zhou.html
SGD
1012
http://www.yeastgenome.org/
sgTarget
5
http://www.ysbl.york.ac.uk/sgTarget/
SITEHOUND-web
21
http://sitehound.sanchezlab.org
SLITHER
5
http://bioinfo.mc.ntu.edu.tw/slither/
SMAP-WS
10
http://kryptonite.ucsd.edu/opal2/GetServicesList.do
SPACE
692
http://ligin.weizmann.ac.il/space/
SplitPocket
10
http://pocket.uchicago.edu/
Spritz
303
http://distill.ucd.ie/spritz/
STING Millenium
168
http://luna.bioc.columbia.edu/SMS/STINGm/
Structural Genomics of Histone Tail Recognition
4
http://apps.thesgc.org/resources/histone_tails/
SwissDock
5
http://www.swissdock.ch
T-COFFEE
4274
http://www.tcoffee.org/
TOPSAN
4
http://www.topsan.org
TreeDet
548
http://treedetv2.bioinfo.cnio.es/treedet/index.html
VnD
5
http://vnd.kobic.re.kr:8080/VnD/
WebFEATURE
121
http://feature.stanford.edu/webfeature/
webPIPSA
66
http://pipsa.h-its.org
WIWS
8
http://swift.cmbi.ru.nl/
Wurst
42
http://www.zbh.uni-hamburg.de/wurst/
ZiFiT
76
http://bindr.gdcb.iastate.edu/ZiFiT/
Zinc Finger Tools
984
http://www.scripps.edu/mb/barbas/zfdesign/zfdesignhome.php

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