Bioinformatics Links Directory - Contents tagged as 'molecular biology'http://bioinformatics.ca/links_directory/tag/molecular-biologyhttp://bioinformatics.ca/links_directory/tag/molecular-biology/feed en ePMVhttp://epmv.scripps.edu/We have developed an open-source plug-in, embedded Python Molecular Viewer (ePMV), that runs molecular modeling software directly inside of professional 3D animation applications (blender,maya and cinema4D) to provide simultaneous access the capabilities of all of the systems. Uniting host and scientific algorithms into a single interface allows users from varied backgrounds to assemble professional quality visuals and to perform computational experiments with relative ease. 12742Tue, 14 May 2013 00:20:38 -0400 BioNumbershttp://www.bionumbers.hms.harvard.eduBioNumbers (http://www.bionumbers.hms.harvard.edu) is a database of key numbers in molecular and cell biology--the quantitative properties of biological systems of interest to computational, systems and molecular cell biologists. Contents of the database range from cell sizes to metabolite concentrations, from reaction rates to generation times, from genome sizes to the number of mitochondria in a cell. All numbers are taken directly from a literature source and that reference is provided with the number.11735Mon, 20 May 2013 22:10:22 -0400 KEGGhttp://www.genome.ad.jp/keggThe KEGG PATHWAY database contains pathway maps for the molecular systems in both normal and perturbed states. In the KEGG DISEASE database, each disease is represented by a list of known disease genes, any known environmental factors at the molecular level, diagnostic markers and therapeutic drugs, which may reflect the underlying molecular system. The KEGG DRUG database contains chemical structures and/or chemical components of all drugs in Japan, including crude drugs and TCM (Traditional Chinese Medicine) formulas, and drugs in the USA and Europe. The new disease/drug information resource named KEGG MEDICUS can be used as a reference knowledge base for computational analysis of molecular networks, especially, by integrating large-scale experimental datasets.11672Sun, 19 May 2013 21:50:35 -0400 BCM Search Launcherhttp://searchlauncher.bcm.tmc.edu/Molecular biology-related search and analysis services organized by function; single point-of-entry for related searches (e.g., a single page for launching protein sequence searches using standard parameters).11239Tue, 21 May 2013 08:40:49 -0400 EMBOSShttp://emboss.bioinformatics.nl/Diverse suite of tools for sequence analysis; many programs analagous to GCG; context-sensitive help for each tool.9583Fri, 17 May 2013 00:30:38 -0400 GenomeNethttp://www.genome.ad.jp/Network of database and computational resources including KEGG (pathways, interactions, etc.) and DBGET/LinkDB (an integrated database retrieval system). It also hosts several web-based tools for sequence analysis (ie. Blast, Motif, Clustal W)9547Sat, 18 May 2013 22:20:18 -0400 BIND - The Biomolecular Interaction Network Databasehttp://bond.unleashedinformatics.com/Action?Stores full descriptions of interactions, molecular complexes and pathways; researchers are able to submit new records.9267Mon, 20 May 2013 03:30:22 -0400