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Links tagged with 'linkage disequilibrium'

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ICSNPathwayTool Content

http://icsnpathway.psych.ac.cn/ [open in a new window]

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Human Genome > Genomics
Human Genome > Sequence Polymorphisms

ICSNPathway is a web tool for the identification of candidate causal SNPs and their corresponding candidate causal pathways from genome wide association studies. ISCNPathway integrates linkage disequilibrium analysis, functional SNP annotation and pathway based analysis to identify these SNPs and pathways.

links directory index: 7
TitlePublication YearGoogle Scholar Citation Count
ICSNPathway: identify candidate causal SNPs and pathways from genome-wide association study by one analytical framework20117
NAR Web Server Issue 2011
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tagsgenome-wide association study humans linkage disequilibrium rheumatoid arthritis single nucleotide polymorphism

ISTECH SNPAnalyzerTool Content

http://snp.istech.info/istech/board/login_form.jsp [open in a new window]

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DNA > Sequence Polymorphisms
Human Genome > Sequence Polymorphisms

ISTECH SNPAnalyzer is a tool for the statistical analysis of SNP data that includes Hardy Weinberg equilibrium (HWE), haplotype estimation, linkage disequilibrium (LD), and QTL analyses. Registration required; some browser requirements and set-up necessary.

links directory index: 38
TitlePublication YearGoogle Scholar Citation Count
SNPAnalyzer: a web-based integrated workbench for single-nucleotide polymorphism analysis200538
NAR Web Server Issue 2005
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tagsalgorithms dna sequence analysis gene frequency genetic predisposition to disease genotype haplotypes humans linkage disequilibrium phenotype quantitative trait loci single nucleotide polymorphism systems integration

QuickSNPTool Content

http://bioinformoodics.jhmi.edu/quickSNP.pl [open in a new window]

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DNA > Sequence Polymorphisms
Human Genome > Sequence Polymorphisms

QuickSNP is a resource for the selection of tagSNPs in the human genome that includes a gene-centric selection module.

links directory index: 13
TitlePublication YearGoogle Scholar Citation Count
QuickSNP: an automated web server for selection of tagSNPs200713
NAR Web Server Issue 2007
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tagsalgorithms animals automation chromosome mapping computational biology dna sequence analysis genetic databases genetic models genotype human genome humans linkage disequilibrium single nucleotide polymorphism

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