Links tagged with 'dna sequence analysis'

Found 175 links

Displaying 175 links

TitleTypeCitation CountURL
AGenDA
11
http://bibiserv.techfak.uni-bielefeld.de/agenda/
ALGGEN
276
http://alggen.lsi.upc.es/
ALTER
9
http://sing.ei.uvigo.es/ALTER/
Alternative Splicing Gallery
90
http://statgen.ncsu.edu/asg/
AMIGene
70
http://www.genoscope.cns.fr/agc/tools/amigene/Form/form.php
AntiHunter 2.0
11
http://bio.ifom-ieo-campus.it/antihunter
AStalavista
16
http://genome.imim.es/astalavista/
Asterias
555
http://asterias.bioinfo.cnio.es/
AUGUSTUS
233
http://bioinf.uni-greifswald.de/augustus
BEARR
15
http://giscompute.gis.a-star.edu.sg/~vega/BEARR1.0/
Berkeley Drosophila Genome Project
370
http://www.fruitfly.org/
BioBayesNet
33
http://biwww3.informatik.uni-freiburg.de:8080/BioBayesNet/
BiQ Analyzer HT
225
http://biq-analyzer-ht.bioinf.mpi-inf.mpg.de/
BWA
1676
http://bio-bwa.sourceforge.net/
BWT-SW
47
http://i.cs.hku.hk/~ckwong3/bwtsw/
CENTDIST
6
http://compbio.ddns.comp.nus.edu.sg/~chipseq/centdist/
CHAOS/DIALIGN WWW server
214
http://dialign.gobics.de/chaos-dialign-submission
Cluster Buster
171
http://zlab.bu.edu/cluster-buster/
CMA
66
http://www.gene-regulation.com/pub/programs/cma/CMA.html
CONREAL
125
http://conreal.niob.knaw.nl/
Consite
514
http://www.phylofoot.org/consite/
CorGen
11
http://corgen.molgen.mpg.de
CRP
49
http://fasta.bioch.virginia.edu/crp/
DIALIGN
1034
http://bibiserv.techfak.uni-bielefeld.de/dialign/
DINAMelt
944
http://mfold.rna.albany.edu/?q=DINAMelt
dnaMATE
77
http://protein.bio.puc.cl/cardex/servers/dnaMATE/index.html
DNannotator
14
http://bioapp.psych.uic.edu/DNannotator.htm
ECR Browser
222
http://ecrbrowser.dcode.org/
EGassembler
58
http://egassembler.hgc.jp
Electronic PCR
242
http://www.ncbi.nlm.nih.gov/sutils/e-pcr
enoLOGOS
103
http://biodev.hgen.pitt.edu/enologos/
Ensembl Drosophila Genome Browser
865
http://www.ensembl.org/Drosophila_melanogaster/
Ensembl Fugu Genome Browser
865
http://www.ensembl.org/Fugu_rubripes/
Ensembl Human Genome Browser
865
http://www.ensembl.org/Homo_sapiens/
Ensembl Mosquito Genome Browser
865
http://www.ensembl.org/Anopheles_gambiae/
Ensembl Mouse Genome Browser
865
http://www.ensembl.org/Mus_musculus/index.html
Ensembl Rat Genome Browser
865
http://www.ensembl.org/Rattus_norvegicus/
EnteriX
61
http://enterix.cbcb.umd.edu/
ESTExplorer
166
http://estexplorer.biolinfo.org
EUGENE'HOM
37
http://genopole.toulouse.inra.fr/bioinfo/eugene/EuGeneHom/cgi-bin/EuGeneHom.pl
FatiGOplus
1322
http://www.fatigo.org/
FeatureExtract
8
http://www.cbs.dtu.dk/services/FeatureExtract/
Footer
26
http://biodev.hgen.pitt.edu/Footer/
FrameD
64
http://genopole.toulouse.inra.fr/bioinfo/FrameD/FD
GC-Profile
45
http://tubic.tju.edu.cn/GC-Profile/
Gene3D
22
http://gene3d.biochem.ucl.ac.uk/
Genefisher
121
http://bibiserv.techfak.uni-bielefeld.de/genefisher/
GeneFizz
41
http://pbga.pasteur.fr/GeneFizz/
GeneHub-GEPIS
36
http://www.cgl.ucsf.edu/Research/genentech/genehub-gepis/
GenePath2
118
http://www.genepath.org/genepath2
GeneZilla
41
http://www.genezilla.org
Geno2pheno
363
http://www.geno2pheno.org/cgi-bin/geno2pheno.pl
Genome Biology Release 3 of the Drosophila genome
1971
http://genomebiology.com/series/drosophila
GENSCAN
3198
http://genes.mit.edu/GENSCAN.html
Glimmer
2291
http://cbcb.umd.edu/software/glimmer/
GLUE, GLUE-IT, PEDEL, PEDEL-AA and DRIVeR
122
http://guinevere.otago.ac.nz/stats.html
GOblet
169
http://goblet.molgen.mpg.de/
IBM Bioinformatics and Pattern Discovery Group
714
http://cbcsrv.watson.ibm.com/Tspd.html
IMCB - Fugu Genome Project
1759
http://www.fugu-sg.org/
IMGT/V-QUEST
349
http://imgt.cines.fr/
inGAP-sv
1
http://ingap.sourceforge.net
IRESite
14
http://www.iresite.org
ISTECH SNPAnalyzer
38
http://snp.istech.info/istech/board/login_form.jsp
Kalign, Kalignvu, and Mumsa
319
http://msa.cgb.ki.se/cgi-bin/msa.cgi
KARMA
13
http://biryani.med.yale.edu/karma/cgi-bin/mysql/karma.pl
Kinefold
83
http://kinefold.u-strasbg.fr/
LAGAN
749
http://lagan.stanford.edu/lagan_web/index.shtml
LowComplexity
49
http://wwwmgs.bionet.nsc.ru/mgs/programs/low_complexity/
LTR_Finder
68
http://tlife.fudan.edu.cn/ltr_finder/
Mammalian Gene Collection
1557
http://mgc.nci.nih.gov/
Match
591
http://www.gene-regulation.com/pub/programs.html#match
MatchMiner
150
http://discover.nci.nih.gov/matchminer/
MAVID
329
http://bio.math.berkeley.edu/mavid/download/
MelinaII
6
http://melina2.hgc.jp/public/index.html
MEME Suite
3841
http://meme.nbcr.net/meme/intro.html
metaSHARK
74
http://bioinformatics.leeds.ac.uk/shark/
mGene.web
35
http://www.mgene.org/web
MicroFootPrinter
598
http://bio.cs.washington.edu/MicroFootPrinter.html
MLST
2035
http://www.mlst.net/
MoD Tools
42
http://159.149.109.16/modtools/
ModelTest Sever
13810
http://darwin.uvigo.es/software/modeltest_server.html
MotifViz
27
http://biowulf.bu.edu/MotifViz/
MPromDb update 2010
3
http://bioinformatics.wistar.upenn.edu/MPromDb/
MultiPhyl
106
http://www.cs.nuim.ie/distributed/multiphyl.php
Mutalyzer
76
https://mutalyzer.nl/
NAST
471
http://greengenes.lbl.gov/cgi-bin/nph-NAST_align.cgi
NCBI Human DNA Reference Sequence
1916
http://www.ncbi.nlm.nih.gov/RefSeq/
NEMBASE4
335
http://www.nematodes.org/nembase4/
NGSmethDB
8
http://bioinfo2.ugr.es/NGSmethDB/gbrowse/
NTMG
1
http://oblab.cs.nchu.edu.tw:8080/WebSDL/
NXSensor
6
http://www.sfu.ca/~ibajic/NXSensor/
OligoHeatMap
14
http://bioinfo.unice.fr/ohm/
OPTIMIZER
61
http://genomes.urv.es/OPTIMIZER/
OREST
8
http://mips.gsf.de/genre/proj/orest/index.html
OrfPredictor
54
http://proteomics.ysu.edu/tools/OrfPredictor.html
Orthologue Search Service
73
http://dove.embl-heidelberg.de/Blast2e/
PAL2NAL
245
http://coot.embl.de/pal2nal/
PatMatch
32
http://www.arabidopsis.org/cgi-bin/patmatch/nph-patmatch.pl
PatSearch
105
http://itbtools.ba.itb.cnr.it/patsearch
PBIL
40
http://pbil.univ-lyon1.fr/
PDA
53
http://dbb.nhri.org.tw/primer/
PeakSeq
216
http://archive.gersteinlab.org/proj/PeakSeq/
Pegasys: workflow management for bioinformatics
79
http://www.bioextract.org/query/index.jsp
PHAST
3
http://phast.wishartlab.com/
PHIRE
21
http://www.biw.kuleuven.be/logt/PHIRE.htm
PhyloPat
16
http://www.cmbi.ru.nl/phylopat
Phyloscan
4
http://bayesweb.wadsworth.org/phyloscan/
PicXAA-Web
0
http://gsp.tamu.edu/picxaa/
PlasMapper
33
http://wishart.biology.ualberta.ca/PlasMapper/index.html
POBO
37
http://ekhidna.biocenter.helsinki.fi/poxo/pobo/
POWER
17
http://power.nhri.org.tw/
POXO
92
http://www.bioinfo.biocenter.helsinki.fi/poxo
PREP Suite
49
http://prep.unl.edu/
Primaclade
57
http://www.umsl.edu/services/kellogg/primaclade.html
PromoSer
79
http://biowulf.bu.edu/zlab/PromoSer/
ProteinCCD
14
http://xtal.nki.nl/ccd
Pscan
38
http://www.beaconlab.it/pscan
Pseudomonas Genome Database
2493
http://www.pseudomonas.com
Pseudomonas Genome Project
2364
http://pseudomonas.com/
QGRS Mapper
62
http://bioinformatics.ramapo.edu/QGRS/index.php
QPalma
77
http://www.fml.tuebingen.mpg.de/raetsch/suppl/qpalma
QSRA
29
http://qsra.cgrb.oregonstate.edu/
QuadFinder
29
http://miracle.igib.res.in/quadfinder/
QuickSNP
13
http://bioinformoodics.jhmi.edu/quickSNP.pl
QUMA
61
http://quma.cdb.riken.jp/
RazerS
58
http://www.seqan.de/projects/razers.html
RECON
35
http://wwwmgs.bionet.nsc.ru/mgs/programs/recon/
REDUCE
43
http://bussemaker.bio.columbia.edu/reduce/
Rescue-ESE
785
http://genes.mit.edu/burgelab/rescue-ese/
RevTrans
180
http://www.cbs.dtu.dk/services/RevTrans/
RF_DYMHC
2
http://www.bioinf.seu.edu.cn/Recombination/rf_dymhc.htm
RibEx
60
http://www.ibt.unam.mx/biocomputo/RibEx.html
RMAP
208
http://rulai.cshl.edu/rmap/
rMotif
24
http://bioportal.weizmann.ac.il/~lapidotm/rMotif/html/
RPBS
852
http://bioserv.rpbs.jussieu.fr/
RSAT
1280
http://rsat.ccb.sickkids.ca/
rVISTA
263
http://rvista.dcode.org/
S. pombe genome
1000
http://www.sanger.ac.uk/Projects/S_pombe/
SAGEmap
435
http://www.ncbi.nlm.nih.gov/SAGE/
SAM - Sequence Assembly Manager
6
http://www.bcgsc.ca/platform/bioinfo/software/sam
Satellog
18
http://satellog.bcgsc.ca/
SBT Interface - dbMHC
11
http://www.ncbi.nlm.nih.gov/gv/mhc/sbt.cgi?cmd=main
SEWAL
3
http://sewal.sourceforge.net/
SHORE
N/A
http://1001genomes.org/downloads/shore.html
Short Read Archives
38
http://www.ncbi.nlm.nih.gov/Traces/trace.cgi
SITECON
30
http://wwwmgs.bionet.nsc.ru/mgs/programs/sitecon/
SiteSeer
19
http://rocky.bms.umist.ac.uk/SiteSeer/
SPatt
11
http://stat.genopole.cnrs.fr/spatt/index.html
SplicePort
40
http://spliceport.cs.umd.edu/
T-COFFEE
4274
http://www.tcoffee.org/
Tablet
73
http://bioinf.scri.ac.uk/tablet/
TACT
307
http://jbirc.jbic.or.jp/tact/
TargetIdentifier
26
http://proteomics.ysu.edu/tools/TargetIdentifier.html
TFBScluster
37
http://hscl.cimr.cam.ac.uk/TFBScluster_genome_portal.html
The Sequence Manipulation Suite 2
209
http://bioinformatics.org/sms2/
TIARA
4
http://tiara.gmi.ac.kr
TIGR Software Tools
56
http://www.tigr.org/software/
TOUCAN 2
296
http://www.esat.kuleuven.ac.be/~saerts/software/toucan.php
TRACTS
6
http://bioportal.weizmann.ac.il/tracts/tracts.html
TranslatorX
21
http://translatorx.co.uk
tRNADB-CE
2
http://trna.nagahama-i-bio.ac.jp
VARID
2
http://compbio.cs.utoronto.ca/varid/
VarScan
94
http://varscan.sourceforge.net/
VCAKE
122
http://vcake.sourceforge.net/
Velvet
924
http://www.ebi.ac.uk/~zerbino/velvet/
Virtual Ribosome
22
http://www.cbs.dtu.dk/services/VirtualRibosome/
WAViS
4
http://wavis.img.cas.cz/
WEB-THERMODYN
136
http://www.gsa.buffalo.edu/dna/dk/WEBTHERMODYN/
WebGMAP
2
http://www.bioinfolab.org/software/webgmap
WebMOTIFS
80
http://fraenkel.mit.edu/webmotifs/
WebTraceMiner
10
http://www.conifergdb.org/software/wtm1.2/
xREI
1
http://biowiki.org/XreiProgram
YMF 3.0
181
http://wingless.cs.washington.edu/YMF/YMFWeb/YMFInput.pl
ZiFiT
76
http://bindr.gdcb.iastate.edu/ZiFiT/
Zinc Finger Tools
984
http://www.scripps.edu/mb/barbas/zfdesign/zfdesignhome.php

Associated Tag Cloud