Alignment Editing and Visualization

Tools for viewing, coloring, and editing sequence alignments.

Found 33 links

Displaying 33 links

TitleTypeCitation CountURL
@TOME-2
14
http://abcis.cbs.cnrs.fr/AT2/
ALGGEN
276
http://alggen.lsi.upc.es/
BoxShade
7
http://www.ch.embnet.org/software/BOX_form.html
CHAOS/DIALIGN WWW server
214
http://dialign.gobics.de/chaos-dialign-submission
EMBL-EBI Framework
53
http://www.ebi.ac.uk/Tools/sss
EMBOSS
2541
http://emboss.bioinformatics.nl/
enoLOGOS
103
http://biodev.hgen.pitt.edu/enologos/
Enrichment Map Cytoscape Plugin
26
http://baderlab.org/Software/EnrichmentMap
EnteriX
61
http://enterix.cbcb.umd.edu/
ESPript 3.0
2009
http://espript.ibcp.fr/ESPript/ESPript/index.php
GeneDoc
N/A
http://www.psc.edu/biomed/genedoc/
JOY
290
http://tardis.nibio.go.jp/cgi-bin/joy/joy.cgi
Kalign, Kalignvu, and Mumsa
319
http://msa.cgb.ki.se/cgi-bin/msa.cgi
LigAlign
3
http://compbio.cs.toronto.edu/ligalign/
MapView
38
http://evolution.sysu.edu.cn/mapview/
Mauve
590
http://gel.ahabs.wisc.edu/mauve/
MIGenAS Toolkit
16
http://www.migenas.org/
MISTIC
N/A
http://mistic.leloir.org.ar
QPalma
77
http://www.fml.tuebingen.mpg.de/raetsch/suppl/qpalma
SAM - Sequence Assembly Manager
6
http://www.bcgsc.ca/platform/bioinfo/software/sam
Seaview
1544
http://pbil.univ-lyon1.fr/software/seaview.html
SequenceJuxtaposer
N/A
http://www.cs.ubc.ca/~tmm/papers/sj/
Sequlator
N/A
http://sequlator.com
SeqVISTA
59
http://zlab.bu.edu/SeqVISTA/
SEWAL
3
http://sewal.sourceforge.net/
STRAP
121
http://www.bioinformatics.org/strap/
Tablet
73
http://bioinf.scri.ac.uk/tablet/
TranslatorX
21
http://translatorx.co.uk
trimAl
64
http://trimal.cgenomics.org
Viral Bioinformatics
503
http://athena.bioc.uvic.ca/
WAViS
4
http://wavis.img.cas.cz/
WebGMAP
2
http://www.bioinfolab.org/software/webgmap
WebLogo
N/A
http://weblogo.berkeley.edu/

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